WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036953 Gene Name  Cbr-sfxn-1.5
Sequence Name  ? CBG17273 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable monoatomic ion transmembrane transporter activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans sfxn-1.5. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17273.1 CBG17273.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17273 CBG17273   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00048159
WBVar00048124
WBVar00048119
WBVar00048134
WBVar00048129
WBVar00048144
WBVar00048139
WBVar00048154
WBVar00048149
WBVar00048114
WBVar00018324
WBVar00018319
WBVar00018314
WBVar00125083
WBVar00125084
WBVar00125082
WBVar00125085
WBVar00125086

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sfxn-1.5, ACCAAATCGAGCCAGAGCTTGCCGAGAAGCTCAAGAATTTGCCGAACCCGCCAAAGCAGC, WBGene00036953   Expr1066800 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region