WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036550 Gene Name  Cbr-prp-8
Sequence Name  ? CBG16670 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable U5 snRNA binding activity; U6 snRNA binding activity; and metallopeptidase activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of spliceosomal complex. Is an ortholog of C. elegans prp-8. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16670.1 CBG16670.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16670 CBG16670   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-prp-8, GTCTGTCTTTCTAATCCTAAAGAATATTACCATGAAGATCATCGCCCAGTTCACTTCCAC, WBGene00036550   Expr1057706 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  part_of
  enables
  enables

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  part_of
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region