WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036414 Gene Name  Cbr-ceh-20
Sequence Name  ? CBG16494 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be located in nucleus. Is an ortholog of C. elegans ceh-20. In C. elegans, ceh-20 is involved in several processes, including cell differentiation; positive regulation of mesodermal cell fate specification; and positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16494b.2 CBG16494b.2   [unknown]
Transcript:CBG16494b.1 CBG16494b.1   [unknown]
Transcript:CBG16494a.1 CBG16494a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16494b CBG16494b   [unknown]
CDS:CBG16494a CBG16494a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ceh-20, AGAAATTTCTCGAAACAAGCGACAGAAGTTCTGAATGAGTACTTCTATGGACACCTCTCC, WBGene00036414   Expr1062355 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region