WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036378 Gene Name  Cbr-parg-2
Sequence Name  ? CBG16441 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable poly(ADP-ribose) glycohydrolase activity. Predicted to be involved in carbohydrate metabolic process and regulation of DNA repair. Is an ortholog of C. elegans parg-2. In C. elegans, parg-2 is involved in nucleotide-sugar metabolic process and response to gamma radiation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16441.1 CBG16441.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16441 CBG16441   [unknown]

0 RNAi Result

26 Allele

Public Name
WBVar00123909
WBVar00123921
WBVar00123920
WBVar00123923
WBVar00123922
WBVar00123924
WBVar00123910
WBVar00123912
WBVar00123911
WBVar00123914
WBVar00123913
WBVar00123916
WBVar00123915
WBVar00123918
WBVar00123917
WBVar00123919
WBVar00021307
WBVar00021312
WBVar00021317
WBVar00021322
WBVar00021327
WBVar00021332
WBVar00021337
WBVar00021292
WBVar00021297
WBVar00021302

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pme-3, AAGAAATCCGTTTCCTAATGTGTCCCGAAATGATTGTCGGAATGTTGCTGACGGACAAAA, WBGene00036378   Expr1063480 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region