Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG15941.1 | CBG15941.1 | [unknown] |
Other
12 Allele
| Public Name |
|---|
| WBVar00047737 |
| WBVar00020122 |
| WBVar00020107 |
| WBVar00020157 |
| WBVar00020142 |
| WBVar00020127 |
| WBVar00020112 |
| WBVar00020147 |
| WBVar00020132 |
| WBVar00020117 |
| WBVar00020152 |
| WBVar00020137 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day6_vs_Day1_downregulated |
1 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| Cbr-ptr-5, TGTGCCACGCCGTGACAGTACCAATAGCATTGAAATGCAGAAGATGGAGCGGAAAGATCC, WBGene00036040 | Expr1067357 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
