Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG15043.1 | CBG15043.1 | [unknown] |
Other
33 Allele
| Public Name |
|---|
| WBVar00017987 |
| WBVar00017932 |
| WBVar00017937 |
| WBVar00017982 |
| WBVar00017977 |
| WBVar00017972 |
| WBVar00017967 |
| WBVar00017962 |
| WBVar00017957 |
| WBVar00017952 |
| WBVar00017942 |
| WBVar00017947 |
| WBVar00122058 |
| WBVar00122057 |
| WBVar00122050 |
| WBVar00122052 |
| WBVar00122051 |
| WBVar00122054 |
| WBVar00122053 |
| WBVar00122056 |
| WBVar00122055 |
| WBVar00122047 |
| WBVar00122046 |
| WBVar00122049 |
| WBVar00122048 |
| WBVar00122041 |
| WBVar00122040 |
| WBVar00122043 |
| WBVar00122042 |
| WBVar00122045 |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day6_vs_Day1_downregulated | |
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day1_upregulated |
1 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| CBG15043, AACAAGACGAGACCAACGATGAGCTGAACCATTTTGAGAACAAAACCGAGCGACTTCTCT, WBGene00035391 | Expr1061808 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
