WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035344 Gene Name  Cbr-rom-5
Sequence Name  ? CBG14977 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable serine-type endopeptidase activity. Predicted to be located in membrane. Is an ortholog of C. elegans rom-5. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14977b.1 CBG14977b.1   [unknown]
Transcript:CBG14977a.1 CBG14977a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14977a CBG14977a   [unknown]
CDS:CBG14977b CBG14977b   [unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00121928
WBVar00121929
WBVar00121940
WBVar00121941
WBVar00121942
WBVar00121943
WBVar00121930
WBVar00121931
WBVar00121932
WBVar00121933
WBVar00121934
WBVar00121935
WBVar00121936
WBVar00121937
WBVar00121938
WBVar00121939
WBVar00028599

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-rom-5, TTGATATTCGTACCCGGATTTGAATTCTCCGCCAAAAGTGCAGTATATGGAATCATTGCA, WBGene00035344   Expr1062203 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region