WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035248 Gene Name  Cbr-gcy-28
Sequence Name  ? CBG14865 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein kinase activity. Predicted to be involved in cyclic nucleotide biosynthetic process; intracellular signal transduction; and protein phosphorylation. Predicted to be located in membrane. Is an ortholog of C. elegans gcy-28. In C. elegans, gcy-28 is involved in chemotaxis; olfactory behavior; and sensory perception. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14865c.1 CBG14865c.1   [unknown]
Transcript:CBG14865b.1 CBG14865b.1   [unknown]
Transcript:CBG14865a.1 CBG14865a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14865a CBG14865a   [unknown]
CDS:CBG14865b CBG14865b   [unknown]
CDS:CBG14865c CBG14865c   [unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00001619
WBVar00121770
WBVar00121782
WBVar00121783
WBVar00121784
WBVar00121785
WBVar00121780
WBVar00121781
WBVar00121771
WBVar00121772
WBVar00121773
WBVar00121774
WBVar00121775
WBVar00121776
WBVar00121777
WBVar00121778
WBVar00121779

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-gcy-28, GATGAAGGGCAAAGGAATGCAGACGACGTACTGGCTGCGTGGCTACAAGGACGTCGAGAT, WBGene00035248   Expr1051171 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG14864, GATGAGGATTTGGTGATAGAACGGGAGACGTTTAAGCAATGGTTGAGAGAGATTTCAATG, WBGene00035247   Expr1064311 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG25194, TTTTAGAATATCCTCCAAATCAGTTTTCATGTGTTTTTTGTTTCGATCCACCATCTTCTT, WBGene00086608   Expr1052679 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  involved_in
  located_in
  enables

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region