WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035105 Gene Name  Cbr-pks-1
Sequence Name  ? CBG14683 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable acyltransferase activity and phosphopantetheine binding activity. Predicted to be involved in biosynthetic process. Is an ortholog of C. elegans pks-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14683a.1 CBG14683a.1   [unknown]
Transcript:CBG14683b.1 CBG14683b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14683a CBG14683a   [unknown]
CDS:CBG14683b CBG14683b   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00121590
WBVar00121584
WBVar00121585
WBVar00121586
WBVar00121587
WBVar00121588
WBVar00121589
WBVar00121580
WBVar00121581
WBVar00121582
WBVar00121583
WBVar00121578
WBVar00121579

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG14683, GAGGTATTCTCAAAGTTCAAGGAATTTCACTGGCTCGCGGATACTTTTCTTCTAATCCTA, WBGene00035105   Expr1061902 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region