WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034652 Gene Name  Cbr-plx-1
Sequence Name  ? CBG13987 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable semaphorin receptor activity. Predicted to be involved in semaphorin-plexin signaling pathway. Is an ortholog of C. elegans plx-1. In C. elegans, plx-1 is involved in epidermis development; nematode male tail mating organ morphogenesis; and nematode male tail tip morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13987a.1 CBG13987a.1   [unknown]
Transcript:CBG13987b.1 CBG13987b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13987a CBG13987a   [unknown]
CDS:CBG13987b CBG13987b   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00120720
WBVar00120721
WBVar00120722
WBVar00120723
WBVar00120724
WBVar00120725
WBVar00120726
WBVar00120392
WBVar00120385

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-plx-1, AGTATATGTTTGACTTTATGGATGAACAAGCCAGAGAACACGGTATCATAGACCCGGAAG, WBGene00034652   Expr1058095 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region