WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034361 Gene Name  Cbr-taf-1
Sequence Name  ? CBG13620 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA polymerase II general transcription initiation factor activity; TBP-class protein binding activity; and histone acetyltransferase activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to be part of transcription factor TFIID complex. Is an ortholog of C. elegans taf-1. In C. elegans, taf-1 is involved in embryo development and transcription initiation at RNA polymerase II promoter. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13620.1 CBG13620.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13620 CBG13620   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00120143
WBVar00120140
WBVar00120141
WBVar00120142
WBVar00120132
WBVar00120133
WBVar00120134
WBVar00120135
WBVar00120136
WBVar00120137
WBVar00120138
WBVar00120139
WBVar00120130
WBVar00120131
WBVar00120129

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-taf-1, CTCAAGGATATGCGTTTGATTCTGGACAATTCGTTGGCGTTCAATGGAGAAGCTAGTATC, WBGene00034361   Expr1051568 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  part_of
  enables

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  part_of
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region