WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034083 Gene Name  Cbr-taf-12
Sequence Name  ? CBG13304 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein heterodimerization activity. Predicted to be involved in DNA-templated transcription initiation. Predicted to be part of SAGA complex and transcription factor TFIID complex. Is an ortholog of C. elegans taf-12. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13304b.1 CBG13304b.1   [unknown]
Transcript:CBG13304a.1 CBG13304a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13304a CBG13304a   [unknown]
CDS:CBG13304b CBG13304b   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00119509
WBVar00119507
WBVar00119508
WBVar00119505
WBVar00119506
WBVar00119514
WBVar00119515
WBVar00119512
WBVar00119513
WBVar00119510
WBVar00119511
WBVar00119503
WBVar00119504
WBVar00119518
WBVar00119519
WBVar00119516
WBVar00119517
WBVar00119520

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-taf-12, ACCTCTCAAAGGAAAAGCATTTGCCAACAGAGGCTCATAAGCAACGAGTCGCTCTGCTGA, WBGene00034083   Expr1060482 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of
  part_of

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region