WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034015 Gene Name  Cbr-gbf-1
Sequence Name  ? CBG13224 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of ARF protein signal transduction. Is an ortholog of C. elegans gbf-1. In C. elegans, gbf-1 is involved in several processes, including endoplasmic reticulum organization; endosomal transport; and mitochondrion organization. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13224.1 CBG13224.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13224 CBG13224   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00119414
WBVar00013569
WBVar00013564
WBVar00013559
WBVar00013554
WBVar00013549
WBVar00013544
WBVar00013539
WBVar00015042
WBVar00015037

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-gbf-1, TGCGGAGTTGATCGAAGTGGAAGACTATGTTGATGAAAAAGGATGGGTCAGCATTCAACG, WBGene00034015   Expr1068214 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region