WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033933 Gene Name  Cbr-aqp-1
Sequence Name  ? CBG13111 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable channel activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans aqp-1. In C. elegans, aqp-1 is involved in defense response to Gram-negative bacterium; glycerol transmembrane transport; and innate immune response. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13111a.1 CBG13111a.1   [unknown]
Transcript:CBG13111b.1 CBG13111b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13111b CBG13111b   [unknown]
CDS:CBG13111a CBG13111a   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00137679
WBVar00137681
WBVar00137680
WBVar00137683
WBVar00137682
WBVar00137684

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-aqp-1, ATATCCAATCAATCCAGCAAGAGATCTAGGACCACGACTTTTCAGTTATTTCATCTACGG, WBGene00033933   Expr1059227 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region