WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033628 Gene Name  Cbr-sin-3
Sequence Name  ? CBG12722 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable transcription corepressor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans sin-3. In C. elegans, sin-3 is involved in several processes, including cell fate specification; nematode male tail mating organ morphogenesis; and vulval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12722a.1 CBG12722a.1   [unknown]
Transcript:CBG12722b.1 CBG12722b.1   [unknown]
Transcript:CBG12722c.1 CBG12722c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12722b CBG12722b   [unknown]
CDS:CBG12722c CBG12722c   [unknown]
CDS:CBG12722a CBG12722a   [unknown]

0 RNAi Result

4 Allele

Public Name
WBVar00118842
WBVar00118844
WBVar00118843
WBVar00118845

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sin-3, TAACATTGATAAACTATTCTCCTCTCTTGCTAAGAATATTCATCATGCTGCGTGTGCGGA, WBGene00033628   Expr1057681 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region