WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033374 Gene Name  CBG12421
Sequence Name  ? CBG12421 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable actin binding activity. Predicted to be involved in positive regulation of Rho protein signal transduction. Is an ortholog of C. elegans F36F2.1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12421a.2 CBG12421a.2   [unknown]
Transcript:CBG12421a.1 CBG12421a.1   [unknown]
Transcript:CBG12421b.1 CBG12421b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12421a CBG12421a   [unknown]
CDS:CBG12421b CBG12421b   [unknown]

0 RNAi Result

19 Allele

Public Name
WBVar00037289
WBVar00037294
WBVar00118523
WBVar00118522
WBVar00118525
WBVar00118524
WBVar00118521
WBVar00118520
WBVar00118527
WBVar00118526
WBVar00118529
WBVar00118528
WBVar00118534
WBVar00118533
WBVar00118536
WBVar00118535
WBVar00118530
WBVar00118532
WBVar00118531

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG12421, ATGATCATGTTATAATCACTCTTCTTCTCGAAGGATCAGAACTAAAGGCGGCTATTCGAG, WBGene00033374   Expr1056594 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region