WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033256 Gene Name  Cbr-npp-15
Sequence Name  ? CBG12284 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be a structural constituent of nuclear pore. Is an ortholog of C. elegans npp-15. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12284.1 CBG12284.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12284 CBG12284   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00039104
WBVar00039059
WBVar00039069
WBVar00039064
WBVar00039079
WBVar00039074
WBVar00039089
WBVar00039084
WBVar00039099
WBVar00039094
WBVar00118453
WBVar00118452
WBVar00118454
WBVar00010714

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-npp-15, GATTCGCACCGATTCTGGAGCAGAGAGAGCTCAGAGTCATCGCCATGTTGGACAAGATGA, WBGene00033256   Expr1070097 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region