WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033032 Gene Name  Cbr-lin-59
Sequence Name  ? CBG12017 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable chromatin binding activity and histone methyltransferase activity. Predicted to be located in nucleus. Expressed in head; hypodermis; neurons; and tail. Is an ortholog of C. elegans lin-59. In C. elegans, lin-59 is involved in several processes, including ectodermal cell fate specification; egg-laying behavior; and nematode male tail tip morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12017b.1 CBG12017b.1   [unknown]
Transcript:CBG12017a.1 CBG12017a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12017b CBG12017b   [unknown]
CDS:CBG12017a CBG12017a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr12460 A weak nuclear signal was observed first at mid-blastula stage and then in many cells throughout development and into adulthood, but expression was stronger in neurons, hypodermal cells and some unidentified cells in the head and the tail.  
Cbr-lin-59, TCAAAGAGTCTTCGAGAAAGTCCCACCTAAAAACAGATATCCTATCAACACACAGCCCTA, WBGene00033032   Expr1066764 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region