WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032909 Gene Name  Cbr-pbrm-1
Sequence Name  ? CBG11867 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable chromatin binding activity. Predicted to be involved in chromatin remodeling. Predicted to be part of RSC-type complex. Is an ortholog of C. elegans pbrm-1. In C. elegans, pbrm-1 is involved in gonad development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11867.1 CBG11867.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11867 CBG11867   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00117969
WBVar00117966
WBVar00117965
WBVar00117968
WBVar00117967
WBVar00117971
WBVar00117970
WBVar00117964
WBVar00117963

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pbrm-1, GAAGAAGACGTCACCAAAGCACTGTGGCGGCTACGCGATGAACTTCTGAAGAGCACATGT, WBGene00032909   Expr1061613 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region