WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032899 Gene Name  Cbr-che-3
Sequence Name  ? CBG11853 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable several functions, including ATP binding activity; dynein intermediate chain binding activity; and dynein light intermediate chain binding activity. Predicted to be involved in microtubule-based movement. Predicted to be part of dynein complex. Is an ortholog of C. elegans che-3. In C. elegans, che-3 is involved in several processes, including dauer entry; non-motile cilium assembly; and positive regulation of dauer larval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11853.1 CBG11853.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11853 CBG11853   [unknown]

0 RNAi Result

28 Allele

Public Name
WBVar00117948
WBVar00117947
WBVar00117949
WBVar00117944
WBVar00117943
WBVar00117946
WBVar00117945
WBVar00117951
WBVar00117950
WBVar00117953
WBVar00117952
WBVar00117942
WBVar00117959
WBVar00117958
WBVar00117955
WBVar00117954
WBVar00117957
WBVar00117956
WBVar00117962
WBVar00117961
WBVar00117960
WBVar00057684
WBVar00057689
WBVar00014192
WBVar00014187
WBVar00014182
WBVar00014177
WBVar00026214

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-che-3, ATCCGTCGACGAACCATTCCTCTTTGGTCTTCCCGAAAATATCAAATATTCATGGCAAAT, WBGene00032899   Expr1060153 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG11857, TTCTATCCGAACATCTTCTTGAATGCATTGAGACAAACCACGTCTCGACAACTCCAAATT, WBGene00032902   Expr1050808 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  part_of

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region