WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032862 Gene Name  CBG11796
Sequence Name  ? CBG11796 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity. Biotype  SO:0001217
Genetic Position  :±
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11796a.1 CBG11796a.1   [unknown]
Transcript:CBG11796b.1 CBG11796b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11796b CBG11796b   [unknown]
CDS:CBG11796a CBG11796a   [unknown]

0 RNAi Result

30 Allele

Public Name
WBVar00013977
WBVar00013972
WBVar00013967
WBVar00013962
WBVar00013957
WBVar00013997
WBVar00013987
WBVar00013982
WBVar00013992
WBVar00014097
WBVar00014092
WBVar00014087
WBVar00014082
WBVar00014027
WBVar00014032
WBVar00014017
WBVar00014022
WBVar00014007
WBVar00014012
WBVar00014002
WBVar00014077
WBVar00014072
WBVar00014067
WBVar00014062
WBVar00014057
WBVar00014052
WBVar00014037
WBVar00014047
WBVar00014042
WBVar00014102

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day9_vs_Day6_downregulated
  Transcripts that showed significantly increased expression in day 3 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day3_vs_Day1_upregulated
  Transcripts that showed significantly increased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day6_vs_Day1_upregulated

0 Expression Patterns

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region