WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032799 Gene Name  Cbr-snf-6
Sequence Name  ? CBG11720 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be located in membrane. Is an ortholog of C. elegans snf-6. In C. elegans, snf-6 is involved in acetylcholine transport; choline transport; and positive regulation of locomotion. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11720.1 CBG11720.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11720 CBG11720   [unknown]

0 RNAi Result

20 Allele

Public Name
WBVar00117449
WBVar00117448
WBVar00117450
WBVar00117456
WBVar00117455
WBVar00117458
WBVar00117457
WBVar00117452
WBVar00117451
WBVar00117454
WBVar00117453
WBVar00117445
WBVar00117447
WBVar00117446
WBVar00117459
WBVar00117461
WBVar00117460
WBVar00117463
WBVar00117462
WBVar00117464

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-snf-6, TGTTTCCTCTGGCTGGATTGGAATTCAATAGAATACGAATCATATCAATTCCCATATTGG, WBGene00032799   Expr1067923 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region