WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032560 Gene Name  Cbr-sptl-3
Sequence Name  ? CBG11447 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable pyridoxal phosphate binding activity. Predicted to be involved in biosynthetic process. Is an ortholog of C. elegans sptl-3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11447.2 CBG11447.2   [unknown]
Transcript:CBG11447.1 CBG11447.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11447 CBG11447   [unknown]

0 RNAi Result

110 Allele

Public Name
WBVar00137467
WBVar00137469
WBVar00137468
WBVar00137470
WBVar00137472
WBVar00137471
WBVar00137474
WBVar00137473
WBVar00137476
WBVar00137475
WBVar00117140
WBVar00117142
WBVar00117141
WBVar00117143
WBVar00117108
WBVar00117107
WBVar00117109
WBVar00117115
WBVar00117114
WBVar00117117
WBVar00117116
WBVar00117111
WBVar00117110
WBVar00117113
WBVar00117112
WBVar00117104
WBVar00117103
WBVar00117106
WBVar00117105
WBVar00117100

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sptl-3, CGAATTTTCACGACGAATGCTCAAACATAACATTGGAATAGTGGCGGTCGGATATCCAGC, WBGene00032560   Expr1063146 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region