WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032303 Gene Name  Cbr-hgap-2
Sequence Name  ? CBG11128 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable GTPase activator activity. Predicted to be involved in regulation of small GTPase mediated signal transduction. Is an ortholog of C. elegans hgap-2. In C. elegans, hgap-2 is involved in determination of adult lifespan. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11128b.1 CBG11128b.1   [unknown]
Transcript:CBG11128c.1 CBG11128c.1   [unknown]
Transcript:CBG11128d.1 CBG11128d.1   [unknown]
Transcript:CBG11128a.1 CBG11128a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11128b CBG11128b   [unknown]
CDS:CBG11128a CBG11128a   [unknown]
CDS:CBG11128d CBG11128d   [unknown]
CDS:CBG11128c CBG11128c   [unknown]

0 RNAi Result

30 Allele

Public Name
WBVar00001579
WBVar00116568
WBVar00116569
WBVar00116570
WBVar00116575
WBVar00116576
WBVar00116577
WBVar00116578
WBVar00116571
WBVar00116572
WBVar00116573
WBVar00116574
WBVar00116557
WBVar00116558
WBVar00116559
WBVar00116564
WBVar00116565
WBVar00116566
WBVar00116567
WBVar00116560
WBVar00116561
WBVar00116562
WBVar00116563
WBVar00116553
WBVar00116554
WBVar00116555
WBVar00116556
WBVar00116552
WBVar00012722
WBVar00012717

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG26146, ACGACAACGACAGCTGAGGATTCAGAAGTGACGGCGGCGGGTTTGGAAAACGGAAAAAAG, WBGene00087560   Expr1064093 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG11126, ATTGGCTCTTTTCGATTGTCAACTCACCATCGAATAGTCAACGTGTCACTGGAAACGATC, WBGene00032302   Expr1057808 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG11128, TCGCTCATCACATCATTTTTATTCATCTAGTCGAGCCGGGAATAGTACAGATAAGGACAC, WBGene00032303   Expr1068851 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region