WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032298 Gene Name  Cbr-sphk-1
Sequence Name  ? CBG11121 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable kinase activity. Is an ortholog of C. elegans sphk-1. In C. elegans, sphk-1 is involved in mitochondrial unfolded protein response; positive regulation of acetylcholine secretion, neurotransmission; and regulation of locomotion. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11121b.1 CBG11121b.1   [unknown]
Transcript:CBG11121a.1 CBG11121a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11121b CBG11121b   [unknown]
CDS:CBG11121a CBG11121a   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00012712

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sphk-1, GGTGCTAGATGGCGAAGTCGTCGAAACGAAATCCATTCAAGTGTCATCGACCCGAAATAA, WBGene00032298   Expr1062175 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region