WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031801 Gene Name  CBG10411
Sequence Name  ? CBG10411 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable heme binding activity and peroxidase activity. Predicted to be involved in response to oxidative stress. Is an ortholog of C. elegans R08F11.7. In C. elegans, R08F11.7 is involved in defense response to Gram-positive bacterium. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10411.1 CBG10411.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10411 CBG10411   [unknown]

0 RNAi Result

38 Allele

Public Name
WBVar00045967
WBVar00045962
WBVar00045972
WBVar00045977
WBVar00045982
WBVar00045987
WBVar00045992
WBVar00045997
WBVar00045927
WBVar00045922
WBVar00045937
WBVar00045932
WBVar00045947
WBVar00045942
WBVar00045957
WBVar00045952
WBVar00045902
WBVar00045907
WBVar00045912
WBVar00045917
WBVar00045857
WBVar00045852
WBVar00045862
WBVar00045867
WBVar00045872
WBVar00045877
WBVar00045892
WBVar00045882
WBVar00045887
WBVar00045897

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG10411, ATTATTGCTGAGCAATTCCGAGCGCTCAAAACTGGAGACAGATTCTACTACGAGAACCAG, WBGene00031801   Expr1058584 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region