WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031525 Gene Name  Cbr-acox-1.5
Sequence Name  ? CBG10043 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable FAD binding activity and acyl-CoA oxidase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in peroxisome. Is an ortholog of C. elegans acox-1.5. In C. elegans, acox-1.5 is involved in pheromone biosynthetic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10043.1 CBG10043.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10043 CBG10043   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00115509
WBVar00115510

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG10043, TGTACAAATGGGCCCAAATGAGTCCACTCAATCAGAAGAACCTGCCTCATGTGGAGAAGT, WBGene00031525   Expr1053315 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables
  enables
  enables
  enables

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region