WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031373 Gene Name  Cbr-hecw-1
Sequence Name  ? CBG09857 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ubiquitin-protein transferase activity. Is an ortholog of C. elegans hecw-1. In C. elegans, hecw-1 is involved in regulation of defense response to bacterium. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09857.1 CBG09857.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09857 CBG09857   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00115347
WBVar00115348
WBVar00115343
WBVar00115344
WBVar00115345
WBVar00115346
WBVar00115340
WBVar00115341
WBVar00115342
WBVar00013614

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG09857, TTTTGAAGGCTTCTCGGCGCTACGTGGAAACGATGAGATCAGCAAGTTTTGTATCGAGAA, WBGene00031373   Expr1066528 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region