WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031163 Gene Name  Cbr-egl-9
Sequence Name  ? CBG09602 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable L-ascorbic acid binding activity; iron ion binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen. Is an ortholog of C. elegans egl-9. In C. elegans, egl-9 is involved in regulation of protein localization and response to hypoxia. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09602a.1 CBG09602a.1   [unknown]
Transcript:CBG09602a.2 CBG09602a.2   [unknown]
Transcript:CBG09602b.1 CBG09602b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09602b CBG09602b   [unknown]
CDS:CBG09602a CBG09602a   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00011082

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-egl-9, CTAGACCCAAGAAGGCTCCAAGCACTCACGAACTGCACAAACTCGATCTTCGTATGTTCC, WBGene00031163   Expr1062870 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region