WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030769 Gene Name  Cbr-akap-1
Sequence Name  ? CBG09108 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity. Is an ortholog of C. elegans akap-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09108c.1 CBG09108c.1   [unknown]
Transcript:CBG09108d.1 CBG09108d.1   [unknown]
Transcript:CBG09108e.1 CBG09108e.1   [unknown]
Transcript:CBG09108a.1 CBG09108a.1   [unknown]
Transcript:CBG09108b.1 CBG09108b.1   [unknown]
 

Other

5 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09108e CBG09108e   [unknown]
CDS:CBG09108d CBG09108d   [unknown]
CDS:CBG09108c CBG09108c   [unknown]
CDS:CBG09108b CBG09108b   [unknown]
CDS:CBG09108a CBG09108a   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00114484
WBVar00114483
WBVar00114488
WBVar00114487
WBVar00114486
WBVar00114485
WBVar00114489
WBVar00114491
WBVar00114490
WBVar00114494
WBVar00114493
WBVar00114492
WBVar00010742
WBVar00010737

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG09108, GGAGATGTGCAAATGAAGCGACCATCATTCTCATCACAGACATCACAAACTGCCGTTGTT, WBGene00030769   Expr1060281 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region