WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030756 Gene Name  Cbr-ida-1
Sequence Name  ? CBG09094 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to be located in secretory granule. Is an ortholog of C. elegans ida-1. In C. elegans, ida-1 is involved in positive regulation of anterior/posterior axon guidance; positive regulation of neurotransmitter secretion; and ventral cord development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09094.1 CBG09094.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09094 CBG09094   [unknown]

0 RNAi Result

22 Allele

Public Name
WBVar00114437
WBVar00114436
WBVar00114435
WBVar00114434
WBVar00114439
WBVar00114438
WBVar00114440
WBVar00114444
WBVar00114443
WBVar00114442
WBVar00114441
WBVar00114429
WBVar00114428
WBVar00114433
WBVar00114432
WBVar00114431
WBVar00114430
WBVar00114448
WBVar00114447
WBVar00114446
WBVar00114445
WBVar00114449

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ida-1, ATTCAAACTTGTCTATGGATGTGTCGCCCAGGAAGTCAATCATCTTCTGAAGTCAATTGC, WBGene00030756   Expr1055547 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region