WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030676 Gene Name  Cbr-swp-1
Sequence Name  ? CBG09000 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity. Predicted to be involved in RNA processing. Is an ortholog of C. elegans swp-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09000a.1 CBG09000a.1   [unknown]
Transcript:CBG09000c.1 CBG09000c.1   [unknown]
Transcript:CBG09000c.3 CBG09000c.3   [unknown]
Transcript:CBG09000c.2 CBG09000c.2   [unknown]
Transcript:CBG09000b.1 CBG09000b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09000c CBG09000c   [unknown]
CDS:CBG09000a CBG09000a   [unknown]
CDS:CBG09000b CBG09000b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-swp-1, CCGAAAAGATCTTCAACTTCATTTTATGGATCCTCACAGTCCATATTACTCGTATTACCA, WBGene00030676   Expr1056806 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region