WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030495 Gene Name  Cbr-ttm-5
Sequence Name  ? CBG08757 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable sphingolipid delta-4 desaturase activity. Predicted to be involved in sphingolipid biosynthetic process. Predicted to be located in membrane. Is an ortholog of C. elegans ttm-5. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08757.1 CBG08757.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08757 CBG08757   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00010272

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG08757, GAATCCAGCGATGGGACCGTATGCACGACTGAAGAGAAAACCTAGAGTGGACCAAGAATT, WBGene00030495   Expr1062288 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region