WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030331 Gene Name  Cbr-rpl-28
Sequence Name  ? CBG08569 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rpl-28. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08569a.1 CBG08569a.1   [unknown]
Transcript:CBG08569b.1 CBG08569b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08569b CBG08569b   [unknown]
CDS:CBG08569a CBG08569a   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00113791
WBVar00113790
WBVar00113795
WBVar00113794
WBVar00113793
WBVar00113792

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-rpl-28, GTCCGCTCTTTGGCTAAGAACACCGGATTCAGCAAGTTCCAGAAGCTCGCTCAACGTCGC, WBGene00030331   Expr1058869 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region