WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030186 Gene Name  Cbr-mec-3
Sequence Name  ? CBG08386 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity. Is an ortholog of C. elegans mec-3. In C. elegans, mec-3 is involved in several processes, including mechanosensory behavior; neuron projection organization; and positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08386b.1 CBG08386b.1   [unknown]
Transcript:CBG08386a.1 CBG08386a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08386a CBG08386a   [unknown]
CDS:CBG08386b CBG08386b   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00009912
WBVar00009917
WBVar00009922
WBVar00009902
WBVar00009907
WBVar00009927
WBVar00009932
WBVar00009892
WBVar00009897

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-mec-3, AGAGGCGGCTGAAACATTTGTGCAATTATTTGAGACACTATGAGCAGAGAGGACTGATTC, WBGene00030186   Expr1061023 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region