WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030140 Gene Name  Cbr-taf-2
Sequence Name  ? CBG08327 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metallopeptidase activity and zinc ion binding activity. Predicted to be part of transcription factor TFIID complex. Is an ortholog of C. elegans taf-2. In C. elegans, taf-2 is involved in embryo development and transcription initiation at RNA polymerase II promoter. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08327.1 CBG08327.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08327 CBG08327   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG08328, AAAGGAAATGCGACGGCTTGTGGAGCTATTCGAAACTCTGTTCCATGGAAGTCTGAAGTG, WBGene00030141   Expr1058708 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-taf-2, GAGAACACCTGCAACACGGAAGAAACCGCCAACAAACTATGGTCCCTCTGCACCAACACA, WBGene00030140   Expr1063302 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region