WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029910 Gene Name  Cbr-png-1
Sequence Name  ? CBG08042 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in glycoprotein catabolic process. Predicted to be located in cytoplasm. Is an ortholog of C. elegans png-1. In C. elegans, png-1 is involved in ERAD pathway; cell redox homeostasis; and negative regulation of collateral sprouting. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08042.1 CBG08042.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08042 CBG08042   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00009762
WBVar00009767
WBVar00009747
WBVar00009752
WBVar00009757
WBVar00009737
WBVar00009742
WBVar00009727
WBVar00009732
WBVar00009772
WBVar00009777

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-png-1, ACAGATGTCACCTGGAGATATGTCTTTGATAGCAAGAAGCTGGTGACCCAAGAGAGAAAT, WBGene00029910   Expr1065782 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region