WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029909 Gene Name  CBG08041
Sequence Name  ? CBG08041 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate proteoglycan biosynthetic process and positive regulation of response to oxidative stress. Predicted to be located in membrane. Is an ortholog of C. elegans Y87G2A.16. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08041.1 CBG08041.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08041 CBG08041   [unknown]

0 RNAi Result

3 Allele

Public Name
WBVar00009707
WBVar00009712
WBVar00009702

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG08041, AAAGCCACGTCATTCATCGAAAAACGTCTCAGGTCTAGTCCGTATCTCATGGAATTGCTT, WBGene00029909   Expr1067945 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region