WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029852 Gene Name  Cbr-nhx-8
Sequence Name  ? CBG07971 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable sodium:proton antiporter activity. Predicted to be involved in proton transmembrane transport; regulation of pH; and sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans nhx-8. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07971b.1 CBG07971b.1   [unknown]
Transcript:CBG07971a.1 CBG07971a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07971b CBG07971b   [unknown]
CDS:CBG07971a CBG07971a   [unknown]

0 RNAi Result

10 Allele

Public Name
WBVar00112956
WBVar00112955
WBVar00112959
WBVar00112958
WBVar00112957
WBVar00112963
WBVar00112962
WBVar00112961
WBVar00112960
WBVar00112964

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-nhx-8, GGAGTCAGTGGAGAGCAACACTTGTTGATTAGTTCGGATAGTGATTCTAATGAATTGTGA, WBGene00029852   Expr1067595 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

8 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

8 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  involved_in
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region