WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029838 Gene Name  CBG07952
Sequence Name  ? CBG07952 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans Y53H1A.2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07952a.1 CBG07952a.1   [unknown]
Transcript:CBG07952c.1 CBG07952c.1   [unknown]
Transcript:CBG07952b.1 CBG07952b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07952c CBG07952c   [unknown]
CDS:CBG07952a CBG07952a   [unknown]
CDS:CBG07952b CBG07952b   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00112901
WBVar00112900
WBVar00112905
WBVar00112904
WBVar00112903
WBVar00112902
WBVar00112899
WBVar00112898
WBVar00027704

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG07952, ATATGTTGGCATCAGAAGTCACAACGACTACGCTTCCAGAATCTTTAGAATCCCTGTTAT, WBGene00029838   Expr1069827 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region