WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029649 Gene Name  Cbr-ser-2
Sequence Name  ? CBG07677 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable octopamine receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans ser-2. In C. elegans, ser-2 is involved in octopamine or tyramine signaling pathway. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07677a.1 CBG07677a.1   [unknown]
Transcript:CBG07677d.1 CBG07677d.1   [unknown]
Transcript:CBG07677c.1 CBG07677c.1   [unknown]
Transcript:CBG07677b.1 CBG07677b.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07677d CBG07677d   [unknown]
CDS:CBG07677c CBG07677c   [unknown]
CDS:CBG07677b CBG07677b   [unknown]
CDS:CBG07677a CBG07677a   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00112732
WBVar00112731
WBVar00112730
WBVar00112735
WBVar00112734
WBVar00112733
WBVar00112729
WBVar00112728
WBVar00112727
WBVar00050524
WBVar00050514
WBVar00050519
WBVar00050509

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ser-2, CATTCCTTTATGGTATTCTGAATTTGGAGTTTCGAAGAGCATTCAAGAAGATTCTCTGCC, WBGene00029649   Expr1061628 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region