WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029110 Gene Name  Cbr-sma-2
Sequence Name  ? CBG06922 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans sma-2. In C. elegans, sma-2 is involved in several processes, including male anatomical structure morphogenesis; nematode pharynx development; and regulation of anatomical structure morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06922.1 CBG06922.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06922 CBG06922   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00136564
WBVar00035069
WBVar00035074
WBVar00111888
WBVar00111889
WBVar00111891
WBVar00111890

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sma-2, AAAATGACATTTATCCGAATGTCATTTGTCAAGGGATGGGGTGCTGAGTATCAGAGACAG, WBGene00029110   Expr1069380 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region