WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028703 Gene Name  Cbr-snt-3
Sequence Name  ? CBG06425 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be located in membrane. Is an ortholog of C. elegans snt-3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06425a.1 CBG06425a.1   [unknown]
Transcript:CBG06425a.2 CBG06425a.2   [unknown]
Transcript:CBG06425b.1 CBG06425b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06425a CBG06425a   [unknown]
CDS:CBG06425b CBG06425b   [unknown]

0 RNAi Result

12 Allele

Public Name
WBVar00032704
WBVar00032709
WBVar00032714
WBVar00032719
WBVar00032699
WBVar00005314
WBVar00005319
WBVar00005304
WBVar00005309
WBVar00005299
WBVar00111459
WBVar00111460

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-snt-3, GTTTAGGAGAAGTATGTCTAGCTCTTCGTTATGTTCCGAACAAGAACAAGCTATCGGTCG, WBGene00028703   Expr1050750 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region