WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028093 Gene Name  Cbr-dmd-3
Sequence Name  ? CBG05690 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans dmd-3. In C. elegans, dmd-3 is involved in several processes, including nematode male tail tip morphogenesis; neuron differentiation; and positive regulation of nematode male tail tip morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05690b.1 CBG05690b.1   [unknown]
Transcript:CBG05690a.1 CBG05690a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05690a CBG05690a   [unknown]
CDS:CBG05690b CBG05690b   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00005977
WBVar00005972

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dmd-3, AATTGAGAAGACGTCAGAAACGCGAGAAGAACAATTTGAACAGCGAGCGCGAGGCACCCC, WBGene00028093   Expr1055876 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region