WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027991 Gene Name  Cbr-sbt-1
Sequence Name  ? CBG05570 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in secretory granule. Is an ortholog of C. elegans sbt-1. In C. elegans, sbt-1 is involved in regulation of muscle contraction. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05570.1 CBG05570.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05570 CBG05570   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00040514
WBVar00040484
WBVar00040489
WBVar00040499
WBVar00040494
WBVar00040509
WBVar00040504
WBVar00012094
WBVar00012099
WBVar00012104
WBVar00012109
WBVar00012114
WBVar00012119

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sbt-1, GTCAACCCGTACCTTCAAGGAGAGCCACTGAGATCCATGCAGAAGAAGGATGGAAAGCAT, WBGene00027991   Expr1058346 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region