WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027726 Gene Name  CBG05214
Sequence Name  ? CBG05214 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans osg-1. In C. elegans, osg-1 is involved in response to oxidative stress. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05214a.1 CBG05214a.1   [unknown]
Transcript:CBG05214c.1 CBG05214c.1   [unknown]
Transcript:CBG05214b.1 CBG05214b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05214c CBG05214c   [unknown]
CDS:CBG05214b CBG05214b   [unknown]
CDS:CBG05214a CBG05214a   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00110113
WBVar00110114
WBVar00110111
WBVar00110112
WBVar00110107
WBVar00110108
WBVar00110109
WBVar00110110

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG05214, GGAACGATGTATTTTTATGCTCTCTGATCTTTTACTGGTGACCAGTGTCAAGAAGAAAGC, WBGene00027726   Expr1061583 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region