WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027671 Gene Name  Cbr-hgap-1
Sequence Name  ? CBG05152 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable GTPase activator activity. Predicted to be involved in positive regulation of GTPase activity and regulation of small GTPase mediated signal transduction. Predicted to be located in nucleus. Is an ortholog of C. elegans hgap-1. In C. elegans, hgap-1 is involved in determination of adult lifespan. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG05152.1 CBG05152.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG05152 CBG05152   [unknown]

0 RNAi Result

12 Allele

Public Name
WBVar00110058
WBVar00110059
WBVar00110056
WBVar00110057
WBVar00110048
WBVar00110049
WBVar00110050
WBVar00110051
WBVar00110054
WBVar00110055
WBVar00110052
WBVar00110053

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG05152, GAATTATCGAAAAGTCTACACTCGGGAGACGATTGCCACGAAATTCTGTGATGTTCTGAT, WBGene00027671   Expr1051619 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  located_in
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  located_in
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region