WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00027356 Gene Name  Cbr-atfs-1
Sequence Name  ? CBG04740 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans atfs-1. In C. elegans, atfs-1 is involved in positive regulation of nematode larval development; regulation of gene expression; and response to stress. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04740a.1 CBG04740a.1   [unknown]
Transcript:CBG04740b.1 CBG04740b.1   [unknown]
Transcript:CBG04740c.1 CBG04740c.1   [unknown]
Transcript:CBG04740d.1 CBG04740d.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04740b CBG04740b   [unknown]
CDS:CBG04740a CBG04740a   [unknown]
CDS:CBG04740d CBG04740d   [unknown]
CDS:CBG04740c CBG04740c   [unknown]

0 RNAi Result

7 Allele

Public Name
cbp40065
cbp40066
WBVar00109652
WBVar00109653
WBVar00109654
WBVar00020659
WBVar00020664

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG04740, GATAGAAGACGTGCGCTGAATCGAATCGCAGCGGTTAGGTATCGAGAGAAGAAGCGAGCT, WBGene00027356   Expr1065935 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region