WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00026774 Gene Name  Cbr-stam-1
Sequence Name  ? CBG04026 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable phosphatidylinositol binding activity and ubiquitin binding activity. Is an ortholog of C. elegans stam-1. In C. elegans, stam-1 is involved in several processes, including ephrin receptor signaling pathway; protein localization to non-motile cilium; and response to hermaphrodite contact. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04026b.1 CBG04026b.1   [unknown]
Transcript:CBG04026a.1 CBG04026a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04026a CBG04026a   [unknown]
CDS:CBG04026b CBG04026b   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00108933
WBVar00108932
WBVar00108931
WBVar00108930
WBVar00108929
WBVar00108928
WBVar00108938
WBVar00108937
WBVar00108936
WBVar00108935
WBVar00108934

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-stam-1, ATCACTTTCATTGATCGTTTCTTTGTACAAAAATCTTGTTGCGGACGGATATTCATTCAC, WBGene00026774   Expr1050039 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region