WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025777 Gene Name  Cbr-gcn-2
Sequence Name  ? CBG02792 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and eukaryotic translation initiation factor 2alpha kinase activity. Predicted to be involved in DNA damage checkpoint signaling and regulation of translational initiation by eIF2 alpha phosphorylation. Is an ortholog of C. elegans gcn-2. In C. elegans, gcn-2 is involved in several processes, including determination of adult lifespan; positive regulation of protein modification process; and response to stress. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02792a.1 CBG02792a.1   [unknown]
Transcript:CBG02792b.1 CBG02792b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02792b CBG02792b   [unknown]
CDS:CBG02792a CBG02792a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG02792, GAAGGTTGATCTAGCTCCTCTTCGTCGCCAACTTCATAACATACTTCATCTTCATCAATC, WBGene00025777   Expr1055032 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region